We use cookies to improve your experience. By continuing to browse this site, you accept our cookie policy.×

Design, synthesis and evaluation of belinostat analogs as histone deacetylase inhibitors

    Jie-Huan Zhang‡

    School of Chemistry & Materials Science, Jiangsu Normal University, Xuzhou 221116, Jiangsu, China

    ‡Authors contributed equally

    Search for more papers by this author

    ,
    Madhusoodanan Mottamal‡

    RCMI Cancer Research Center & Department of Chemistry, Xavier University of Louisiana, New Orleans, LA 70125, USA

    ‡Authors contributed equally

    Search for more papers by this author

    ,
    Hai-Shan Jin

    School of Chemistry & Materials Science, Jiangsu Normal University, Xuzhou 221116, Jiangsu, China

    ,
    Shanchun Guo

    RCMI Cancer Research Center & Department of Chemistry, Xavier University of Louisiana, New Orleans, LA 70125, USA

    ,
    Yan Gu

    School of Chemistry & Materials Science, Jiangsu Normal University, Xuzhou 221116, Jiangsu, China

    ,
    Guangdi Wang

    **Author for correspondence:

    E-mail Address: gwang@xula.edu

    RCMI Cancer Research Center & Department of Chemistry, Xavier University of Louisiana, New Orleans, LA 70125, USA

    &
    Li-Ming Zhao

    *Author for correspondence:

    E-mail Address: lmzhao@jsnu.edu.cn

    School of Chemistry & Materials Science, Jiangsu Normal University, Xuzhou 221116, Jiangsu, China

    State Key Laboratory for Chemistry & Molecular Engineering of Medicinal Resources, Guangxi Normal University, Guilin 541004, Guangxi, China

    Published Online:https://doi.org/10.4155/fmc-2018-0587

    Aim: Histone deacetylase (HDAC) is an attractive target for antitumor therapy. Therefore, the development of novel HDAC inhibitors is warranted. Materials & methods: A series of HDAC inhibitors based on N-hydroxycinnamamide fragment was designed as the clinically used belinostat analog using amide as the connecting unit. All target compounds were evaluated for their in vitro HDAC inhibitory activities and some selected compounds were tested for their antiproliferative activities. Conclusion: Among them, compound 7e showed an IC50 value of 11.5 nM in inhibiting the HDAC in a pan-HDAC assay, being the most active compound of the series.

    Papers of special note have been highlighted as: • of interest; •• of considerable interest

    References

    • 1. Bailly C. Cell-targeted cytotoxics: a new generation of cytotoxic agents for cancer treatment. Phytochem. Rev. 13(1), 171–181 (2014).
    • 2. Paris M, Porcelloni M, Binaschi M, Fattori D. Histone deacetylase inhibitors: from bench to clinic. J. Med. Chem. 51(6), 1505–1529 (2008).
    • 3. Mottamal M, Zheng S, Huang TL, Wang G. Histone deacetylase inhibitors in clinical studies as templates for new anticancer agents. Molecules 20(3), 3898–3941 (2015).
    • 4. Lin RJ, Nagy L, Inoue S, Shao W, Miller WH Jr, Evans RM. Role of the histone deacetylase complex in acute promyelocytic leukemia. Nature 391(6669), 811–814 (1998).
    • 5. Kouzarides T. Histone acetylases and deacetylases in cell proliferation. Curr. Opin. Genet. Dev. 9(1), 40–48 (1999).
    • 6. Marks PA, Breslow R. Dimethyl sulfoxide to vorinostat: development of this histone deacetylase inhibitor as an anticancer drug. Nat. Biotechnol. 25(1), 84–90 (2007).
    • 7. Prince HM, Dickinson M, Khot A. Romidepsin for cutaneous T-cell lymphoma. Future Oncol. 9(12), 1819–1827 (2013).
    • 8. Lee HZ, Kwitkowski VE, Del Valle PL et al. FDA approval: belinostat for the treatment of patients with relapsed or refractory peripheral T-cell lymphoma. Clin. Cancer Res. 21(12), 2666–2670 (2015).
    • 9. Garnock-Jones KP. Panobinostat: first global approval. Drugs 75(6), 695–704 (2015).
    • 10. Chan TS, Tse E, Kwong YL. Chidamide in the treatment of peripheral T-cell lymphoma. Onco Targets Ther. 10, 347–352 (2017).
    • 11. Raju TN. The Nobel chronicles. 1988: James Whyte Black, (b 1924), Gertrude Elion (1918-99), and George H Hitchings (1905-98). Lancet 355(9208), 1022 (2000).
    • 12. Pontiki E, Hadjipavlou-Litina D. Histone deacetylase inhibitors (HDACIs). Structure–activity relationships: history and new QSAR perspectives. Med. Res. Rev. 32(1), 1–165 (2012). •• Important review on histone deacetylase (HDAC) inhibitors and their structure–activity relationships.
    • 13. Rajak H, Singh A, Raghuwanshi K et al. A structural insight into hydroxamic acid based histone deacetylase inhibitors for the presence of anticancer activity. Curr. Med. Chem. 21(23), 2642–2664 (2014).
    • 14. Zhang Y, Yang P, Chou CJ, Liu C, Wang X, Xu W. Development of N-hydroxycinnamamide-based histone deacetylase inhibitors with an indole-containing cap group. ACS Med. Chem. Lett. 4(2), 235–238 (2013).
    • 15. Tu S, Yuan H, Hu J, Zhao C, Chai R, Cao H. Design, synthesis and biological evaluation of nitro oxide donating N-hydroxycinnamamide derivatives as histone deacetylase inhibitors. Chem. Pharm. Bull. 62(12), 1185–1191 (2014).
    • 16. Li X, Inks ES, Li X et al. Discovery of the first N-hydroxycinnamamide-based histone deacetylase 1/3 dual inhibitors with potent oral antitumor activity. J. Med. Chem. 57(8), 3324–3341 (2014). • Important paper on N-hydroxycinnamamide-based HDAC inhibitors.
    • 17. Zang J, Shi B, Liang X, Gao Q, Xu W, Zhang Y. Development of N-hydroxycinnamamide-based HDAC inhibitors with improved HDAC inhibitory activity and in vitro antitumor activity. Bioorg. Med. Chem. 25(9), 2666–2675 (2017).
    • 18. Chen C, Hou X, Wang G et al. Design, synthesis and biological evaluation of quinoline derivatives as HDAC class I inhibitors. Eur. J. Med. Chem. 133, 11–23 (2017).
    • 19. Yuan Z, Sun Q, Li D et al. Design, synthesis and anticancer potential of NSC-319745 hydroxamic acid derivatives as DNMT and HDAC inhibitors. Eur. J. Med. Chem. 134, 281–292 (2017).
    • 20. Wang DF, Wiest O, Helquist P, Lan-Hargest HY, Wiech NL. On the function of the 14 Å long internal cavity of histone deacetylase-like protein: implications for the design of histone deacetylase inhibitors. J. Med. Chem. 47(13), 3409–3417 (2004).
    • 21. Allen FH. The Cambridge Structural Database: a quarter of a million crystal structures and rising. Acta Cryst. B 58(3), 380–388 (2002).
    • 22. Brameld KA, Kuhn B, Reuter DC, Stahl M. Small molecule conformational preferences derived from crystal structure data. A medicinal chemistry focused analysis. J. Chem. Inf. Model. 48(1), 1–24 (2008).
    • 23. Monneret C. Histone deacetylase inhibitors. Eur. J. Med. Chem. 40(1), 1–13 (2005). • Important review on HDAC inhibitors and future challenges.
    • 24. Murray PM, Bower JF, Cox DK, Galbraith EK, Parker JS, Sweeney JB. A robust first-pass protocol for the Heck-Mizoroki reaction. Org. Process Res. Dev. 17(3), 397–405 (2013).
    • 25. Schrödinger Release 2017–1: Glide, Schrödinger, LLC, New York, NY, USA (2017). https://www.schrodinger.com/glide
    • 26. Harder E, Damm W, Maple J et al. OPLS3: a force field providing broad coverage of drug-like small molecules and proteins. J. Chem. Theory Comput. 12(1), 281–296 (2016).
    • 27. Finn PW, Bandara M, Butcher C et al. Novel sulfonamide derivatives as inhibitors of histone deacetylase. Helv. Chim. Acta 88(7), 1630–1657 (2005).
    • 28. Yang L, Xue X, Zhang Y. Simple and efficient synthesis of belinostat. Synth. Commun. 40(17), 2520–2524 (2010).
    • 29. Wang Q, Luo J, Cao Y, Zhang L, Li C, Yuan Q. A process for preparing belinostat cis-isomer. CN 105367455 A (2016). https://worldwide.espacenet.com/searchResults?DB=EPODOC&submitted=true&locale=en_EP&ST=singleline&compact=false&query=CN105367455
    • 30. Codd R, Braich N, Liu J, Soe CZ, Pakchung AAH. Zn(II)-dependent histone deacetylase inhibitors: suberoylanilide hydroxamic acid and trichostatin A. Int. J. Biochem. Cell B. 41(4), 736–739 (2009).
    • 31. Lauffer BE, Mintzer R, Fong R et al. Histone deacetylase (HDAC) inhibitor kinetic rate constants correlate with cellular histone acetylation but not transcription and cell viability. J. Biol. Chem. 288(37), 26926–26943 (2013).